Kennedy Water Lab

Applying principles of microbiology, data science, and statistics to protect public health and the environment

We aim to characterize microbial community dynamics, occurrence, and persistence in the engineered water cycle and apply these data to protect public health and wellbeing as well as the environment.

Research

Effects of disturbances on microbial community dynamics in distribution systems.

Shifts in microbial community composition can occur because of local or site-to-site variations or system-scale changes that affect the whole distribution system. Intentional disturbances from drinking water treatment facility operations improve water quality in the long-term, but can have unintended consequences. The goal of this project is to investigate the effect of disturbances on microbial communities in distribution systems and inform management practices.

Wastewater-based epidemiology (WBE) for potable reuse

Advanced-treated wastewater can be used as a source of drinking water through direct potable reuse. WBE can help ensure ingestion of recycled water does not result in increased enteric diseases in the contributing community. The goal of this project is to quantify and compare pathogen occurrence in the engineered water cycle for communities with direct, indirect, and de facto potable reuse, and develop a inform monitoring strategies for potable reuse.

Mechanisms of virus inactivation

Enteric viruses in the engineered water cycle are generally quantified via culture methods or molecular methods. While culture methods are ideal for quantifying infectious viruses, molecular methods are still commonly used because they tend to have higher sensitivity and faster turnaround times and not all viruses are easily culturable. The goal of this project is to develop and evaluate molecular methods to assess enteric virus inactivation mechanisms and persistence in the engineered water cycle.

Enhanced microbial monitoring in the engineered water cycle

Enhanced methods of microbial assessment include methods for microbial abundance (e.g., flow cytometry-based cell counts), microbial community composition (e.g., DNA sequencing), and specific microbial targets (e.g., qPCR). The goal of this project is to combine high resolution enhanced microbial assessment data along with physicochemical water quality data and machine learning could aid in early identification of common issues in water systems.

Group Members

Lauren C Kennedy

Principal Investigator

Dr. Kennedy is an assistant professor in the department of Civil Engineering at the University of Texas at El Paso. She earned her B.S. in Environmental and Ecological Engineering at Purdue University and her M.S. as well as her Ph.D. in Civil and Environmental Engineering from the University of California, Berkeley. She continued her training as a postdoc at Stanford University, where she joined the Sewer Coronavirus Alert Network (SCAN) and wastewaterSCAN teams. The Kennedy Water Lab aims to characterize microbial community dynamics, occurrence, and persistence in the engineered water cycle and apply these data to protect public health and wellbeing as well as the environment.

Mya Valenzuela

PhD Student

Mya is a first-year PhD student and researcher in Civil and Environmental Engineering, specializing in wastewater-based epidemiology (WBE). With a deep passion for research, Mya is dedicated to advancing knowledge that can contribute to creating more sustainable communities. Outside of academic pursuits, Mya enjoys staying active through outdoor activities and exploring new destinations through travel.

Angelica Littles

Undergraduate Student

Angelica is an undergraduate Civil Engineering student with a minor in Mathematics. Her current research focuses on managing opportunistic pathogens in drinking water distribution systems. Before joining the lab, Angelica participated in the Louis Stokes Alliance for Minority Participation (LSAMP) Program, where she spent a summer at the University of Texas at San Antonio researching permeable curbs for stormwater pollution. In addition, she wrote a conference paper for the American Society of Engineering Education (ASEE) where she explored her experience as a multiracial individual attending a Hispanic Serving Institute. Aside from research, Angelica is active in multiple student organizations on campus. Angelica was an officer for Chi Epsilon, helped restart the UTEP National Society of Black Engineers (NSBE) chapter, and currently competes with the UTEP forensics speech and debate team. Outside of school, Angelica enjoys reading books, writing stories, baking, traveling, crocheting, embroidery, scrapbooking, trying new restaurants, and watching period dramas.

Cristian Mireles

Undergraduate Student

Cristian is a senior in the Civil Engineering program at UTEP looking to specialize in the water treatment pathway. Currently he is working as an undergraduate research assistant on the UV/AOP project. He is especially passionate about the treatment and consumption of water and its current political implications as they pertain to the greater El Paso area due to having grown up in the region and being exposed to the realities water scarcity and thus hopes to make contribution toward the progress solving this issue. To add he is currently the president of the ASCE student chapter at UTEP which is one of the oldest and most storied organizations on campus but is most known for its success in the annual Concrete Canoe competition which requires the full-scale design and construction of canoe made of specially made concrete. On his free time, he enjoys hiking with his dog and training to have an amateur boxing debut.

Stephanie Romero

Undergraduate Student

Stephanie Romero is an undergraduate student majoring in Civil Engineering, with an associate degree in Architecture. Her current research focuses on analyzing the effects of drinking water source shifts using flow cytometry. After her studies, Stephanie plans to specialize in Water and Environmental Engineering. She is actively engaged as the President of the student chapter of the National Society of Professional Engineers (NSPE). In her free time, Stephanie enjoys drawing, crocheting, gaming, listening to music, and writing.

Publications

Publications last scraped from Google Scholar for Lauren C Kennedy in November 2024
Eauthors contributed equally to the work. *corresponding author

Temperature and particles interact to affect human norovirus and MS2 persistence in surface water

LC Kennedy, SA Lowry, AB Boehm*
(2024). Environmental Science: Processes & Impacts

Persistence of Human Norovirus (GII) in Surface Water: Decay Rate Constants and Inactivation Mechanisms

LC Kennedy, VP Costantini, KA Huynh, SK Loeb, WC Jennings, S Lowry, ...
(2023). Environmental Science & Technology 57 (9), 3671-3679

Stay in the loop: lessons learned about the microbial water quality in pipe loops transitioned from conventional to direct potable reuse water

LC KennedyE, SE MillerE, RS Kantor, HD Greenwald, MJ Adelman, ...
(2023). Environmental Science: Water Research & Technology

Microbial Water Quality through a Full-Scale Advanced Wastewater Treatment Demonstration Facility

S Miller, H Greenwald, LC Kennedy, RS Kantor, R Jiang, A Pisarenko, ...
(2022). ACS Es&t Engineering 2 (12), 2206-2219

Is flushing necessary during building closures? A study of water quality and bacterial communities during extended reductions in building occupancy

H Greenwald, LC Kennedy, A Ehde, Y Duan, CI Olivares, R KantorE*, K NelsonE*
(2022). Frontiers in Water 4, 958523

Estimating Relative Abundance of 2 SARS-CoV-2 Variants through Wastewater Surveillance at 2 Large Metropolitan Sites, United States

AT Yu*, B Hughes, MK Wolfe, T Leon, D Duong, A Rabe, LC Kennedy, ...
(2022). Emerging Infectious Diseases 28 (5), 940-947

Operationalizing a routine wastewater monitoring laboratory for SARS-CoV-2

RS Kantor, HD Greenwald, LC Kennedy, A Hinkle, S Harris-Lovett, ...
(2022). PLOS Water 1 (2), e0000007

Legionella pneumophila occurrence in reduced-occupancy buildings in 11 cities during the COVID-19 pandemic (preprint)

K DowdellE, H GreenwaldE, S Joshi, M Grimard-Conea, S Pitell, Y Song, ...
(2022).

Comparison of RT-qPCR and digital PCR methods for wastewater-based testing of SARS-CoV-2

A Hinkle, HD Greenwald, M Metzger, M Thornton, LC Kennedy, K Loomis, ...
(2022). medRxiv, 2022.06. 15.22276459

SARS-CoV-2 RNA is enriched by orders of magnitude in primary settled solids relative to liquid wastewater at publicly owned treatment works

S Kim, LC Kennedy, MK Wolfe, CS Criddle, DH Duong, A Topol, BJ White, ...
(2022). Environmental Science: Water Research & Technology 8 (4), 757-770

Tools for interpretation of wastewater SARS-CoV-2 temporal and spatial trends demonstrated with data collected in the San Francisco Bay Area

HD GreenwaldE, LC KennedyE, A Hinkle, ON Whitney, VB Fan, ...
(2021). Water Research X 12, 100111

Sewage, Salt, Silica, and SARS-CoV-2 (4S): An Economical Kit-Free Method for Direct Capture of SARS-CoV-2 RNA from Wastewater

ON Whitney, LC Kennedy, VB Fan, A Hinkle, R Kantor, H Greenwald, ...
(2021). Environmental science & technology 55 (8), 4880-4888

Challenges in Measuring the Recovery of SARS-CoV-2 from Wastewater

RS KantorE*, KL NelsonE*, HD Greenwald, LC Kennedy
(2021). Environmental Science & Technology 55 (6), 3514-3519

Genome sequencing of sewage detects regionally prevalent SARS-CoV-2 variants

A Crits-Christoph, RS Kantor, MR Olm, ON Whitney, B Al-Shayeb, YC Lou, ...
(2021). MBio 12 (1), e02703-20

Effect of disinfectant residual, pH, and temperature on microbial abundance in disinfected drinking water distribution systems

LC Kennedy, SE Miller, RS Kantor, KL Nelson*
(2021). Environmental Science: Water Research & Technology 7 (1), 78-92

High-throughput DNA sequencing to profile microbial water quality of potable reuse

MB Leddy, MH Plumlee, RS Kantor, KL Nelson, SE Miller, LC Kennedy, ...
(2018). Water Innov, 33-37

CNC-loaded hydrogel particles generated from single-and double-emulsion drops

C Ye, L Kennedy, K Shirk, UM Córdova-Figueroa, J Youngblood, ...
(2015). Green Materials 3 (1), 25-34

Teaching

    The University of Texas at El Paso

  • CE 2385: Environmental Engineering Fundamentals

    Spring 2024
    CE 2385 introduces the scientific knowledge applied to minimize environmental contaminants and their adverse impacts. Contaminants that impact environmental resources and human health are commonly controlled by applying fundamental concepts, for example from chemistry and fluid mechanics. In this course, students will learn how fundamental concepts can be applied to remove, transport, and/or transform contaminants in engineered and natural systems. This course introduces the principles of water quality engineering, air quality engineering, and hazardous waste management.

  • Stanford University

  • CEE 274P: Environmental Health Microbiology

    Autumn 2022
    Students gain microbiology skills including culture-, microscope-, and molecular-based detection techniques. The course focuses on standard and EPA-approved methods to enumerate and isolate organisms used to assess risk of enteric illnesses, such as coliforms, enterococci, and coliphage, in drinking and recreational waters including lakes, streams, and coastal waters. The course includes a student project to assess the microbial water quality of a natural water.

Join

Below you will find some frequently asked questions about joinning the Kennedy Water Lab.

Who can join the research group?

Graduate student hiring is dependant on funding availability, but generally one graduate student (thesis-based MS or PhD) per year or two joins our research group. Funding availability is clear three to six months before the semester begins. Applicants should have a bachelor's degree in Environmental Engineering, Civil Engineering, or a closely related field. In addition, applicants should demonstrate interest in microbiology in the engineered water cycle.

Undergraduate students from UTEP are welcome and participate in the lab through research courses, undergraduate research assistantships (dependent on funding availability), or through COURI. Please contact Dr. Kennedy to find out about current opportunities.

How can I join the research group?

Submit the required materials to the Civil Engineering program at The University of Texas at El Paso. This will allow Dr. Kennedy to see your full application package to evaluate your fit in the research group. Dr. Kennedy cannot evaluate prospective students for admission to the Kennedy Water Lab outside of this process. Top applicants will also typically be interviewed by Dr. Kennedy. More information about the deadlines for the desired degree program can be found here.

Should I mention Dr. Kennedy in my application to UTEP?

You may list Dr. Kennedy as a faculty member you are interested in working with. If you do so, Dr. Kennedy will be more likely to receive your application package to evaluate it. Dr. Kennedy cannot commit to supervising anyone without reviewing their application package submitted to the Civil Engineering program at The University of Texas at El Paso .

What criteria are important for admission to the research group?

Prospective students with an environmental and/or civil engineering background with a demonstrated interest in microorganisms in the engineered water cycle are strong applicants. Prospective students with laboratory experience and/or strong written and oral communication skills are encouraged to apply. While these criteria are considered, they are not required of all successful candidates.

Are there alternate opportunities to the thesis-based MS and PhD?

If you are interested in a Master’s degree there are two unfunded options you could consider at UTEP:

  • A project-based Master of Science in Civil and Environmental Engineering. For this you would need a faculty mentor and you would need to mention Dr. Kennedy or another faculty member in the application package and confirm whether they can advise you after acceptance. More information.
  • A course-based Master of Engineering in Civil and Environmental Engineering . For this you do not need a faculty mentor. More information.
  • Submit the required materials to the Civil Engineering program at The University of Texas at El Paso. More information about the deadlines for the desired degree program can be found here.

    Please contact Dr. Kennedy if you have any questions.